A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2022-07-05, 16:42
based on data in:
/mnt/x/Disertatie/AFPAP/work/93/7bc318e0178c60a3fde936cbbbb7a9/FADS6/work/multiqc_files
Sequence Analysis
Protein Sequence
Colour scheme:
MMET1Methionine Hydrophobic Non-polarEGLU2Glutamic acid Hydrophilic Polar negativePPRO3Proline Small Non-polarTTHR4Thereonine Small PolarEGLU5Glutamic acid Hydrophilic Polar negativePPRO6Proline Small Non-polarMMET7Methionine Hydrophobic Non-polarEGLU8Glutamic acid Hydrophilic Polar negativePPRO9Proline Small Non-polarTTHR10Thereonine Small PolarEGLU11Glutamic acid Hydrophilic Polar negativePPRO12Proline Small Non-polarMMET13Methionine Hydrophobic Non-polarEGLU14Glutamic acid Hydrophilic Polar negativePPRO15Proline Small Non-polarTTHR16Thereonine Small PolarEGLU17Glutamic acid Hydrophilic Polar negativePPRO18Proline Small Non-polarMMET19Methionine Hydrophobic Non-polarEGLU20Glutamic acid Hydrophilic Polar negativePPRO21Proline Small Non-polarAALA22Alanine Small Hydrophobic Non-polarRARG23Arginine Hydrophilic Polar positiveSSER24Serine Small PolarAALA25Alanine Small Hydrophobic Non-polarHHIS26Histidine Polar positiveRARG27Arginine Hydrophilic Polar positiveGGLY28Glycine Small Non-polarGGLY29Glycine Small Non-polarEGLU30Glutamic acid Hydrophilic Polar negativeAALA31Alanine Small Hydrophobic Non-polarLLEU32Leucine Hydrophobic Non-polarLLEU33Leucine Hydrophobic Non-polarRARG34Arginine Hydrophilic Polar positiveEGLU35Glutamic acid Hydrophilic Polar negativeLLEU36Leucine Hydrophobic Non-polarEGLU37Glutamic acid Hydrophilic Polar negativeVVAL38Valine Hydrophobic Non-polarLLEU39Leucine Hydrophobic Non-polarVVAL40Valine Hydrophobic Non-polarQGLN41Glutamine Hydrophilic PolarDASP42Aspartic acid Small Hydrophilic Polar negativeVVAL43Valine Hydrophobic Non-polarVVAL44Valine Hydrophobic Non-polarRARG45Arginine Hydrophilic Polar positiveTTHR46Thereonine Small PolarSSER47Serine Small PolarSSER48Serine Small PolarWTRP49Tryptophan Hydrophobic Non-polarWTRP50Tryptophan Hydrophobic Non-polarEGLU51Glutamic acid Hydrophilic Polar negativeRARG52Arginine Hydrophilic Polar positiveHHIS53Histidine Polar positiveGGLY54Glycine Small Non-polarVVAL55Valine Hydrophobic Non-polarDASP56Aspartic acid Small Hydrophilic Polar negativeCCYS57Cysteine Small Hydrophobic SpecialAALA58Alanine Small Hydrophobic Non-polarIILE59Isoleucine Hydrophobic Non-polarLLEU60Leucine Hydrophobic Non-polarAALA61Alanine Small Hydrophobic Non-polarLLEU62Leucine Hydrophobic Non-polarSSER63Serine Small PolarLLEU64Leucine Hydrophobic Non-polarFPHE65Phenylalanine Hydrophobic Non-polarAALA66Alanine Small Hydrophobic Non-polarLLEU67Leucine Hydrophobic Non-polarPPRO68Proline Small Non-polarAALA69Alanine Small Hydrophobic Non-polarGGLY70Glycine Small Non-polarFPHE71Phenylalanine Hydrophobic Non-polarLLEU72Leucine Hydrophobic Non-polarCCYS73Cysteine Small Hydrophobic SpecialLLEU74Leucine Hydrophobic Non-polarRARG75Arginine Hydrophilic Polar positiveWTRP76Tryptophan Hydrophobic Non-polarEGLU77Glutamic acid Hydrophilic Polar negativeNASN78Asparagine Small Hydrophilic PolarAALA79Alanine Small Hydrophobic Non-polarLLEU80Leucine Hydrophobic Non-polarVVAL81Valine Hydrophobic Non-polarFPHE82Phenylalanine Hydrophobic Non-polarAALA83Alanine Small Hydrophobic Non-polarSSER84Serine Small PolarGGLY85Glycine Small Non-polarIILE86Isoleucine Hydrophobic Non-polarTTHR87Thereonine Small PolarIILE88Isoleucine Hydrophobic Non-polarLLEU89Leucine Hydrophobic Non-polarGGLY90Glycine Small Non-polarVVAL91Valine Hydrophobic Non-polarCCYS92Cysteine Small Hydrophobic SpecialHHIS93Histidine Polar positiveYTYR94Tyrosine PolarTTHR95Thereonine Small PolarLLEU96Leucine Hydrophobic Non-polarTTHR97Thereonine Small PolarVVAL98Valine Hydrophobic Non-polarKLYS99Lysine Hydrophilic Polar positiveGGLY100Glycine Small Non-polarSSER101Serine Small PolarHHIS102Histidine Polar positiveLLEU103Leucine Hydrophobic Non-polarAALA104Alanine Small Hydrophobic Non-polarTTHR105Thereonine Small PolarHHIS106Histidine Polar positiveGGLY107Glycine Small Non-polarAALA108Alanine Small Hydrophobic Non-polarLLEU109Leucine Hydrophobic Non-polarTTHR110Thereonine Small PolarEGLU111Glutamic acid Hydrophilic Polar negativeSSER112Serine Small PolarKLYS113Lysine Hydrophilic Polar positiveRARG114Arginine Hydrophilic Polar positiveWTRP115Tryptophan Hydrophobic Non-polarSSER116Serine Small PolarKLYS117Lysine Hydrophilic Polar positiveIILE118Isoleucine Hydrophobic Non-polarWTRP119Tryptophan Hydrophobic Non-polarLLEU120Leucine Hydrophobic Non-polarLLEU121Leucine Hydrophobic Non-polarFPHE122Phenylalanine Hydrophobic Non-polarFPHE123Phenylalanine Hydrophobic Non-polarVVAL124Valine Hydrophobic Non-polarEGLU125Glutamic acid Hydrophilic Polar negativeVVAL126Valine Hydrophobic Non-polarCCYS127Cysteine Small Hydrophobic SpecialTTHR128Thereonine Small PolarAALA129Alanine Small Hydrophobic Non-polarFPHE130Phenylalanine Hydrophobic Non-polarTTHR131Thereonine Small PolarAALA132Alanine Small Hydrophobic Non-polarEGLU133Glutamic acid Hydrophilic Polar negativeHHIS134Histidine Polar positiveAALA135Alanine Small Hydrophobic Non-polarTTHR136Thereonine Small PolarHHIS137Histidine Polar positiveGGLY138Glycine Small Non-polarHHIS139Histidine Polar positiveVVAL140Valine Hydrophobic Non-polarKLYS141Lysine Hydrophilic Polar positiveMMET142Methionine Hydrophobic Non-polarHHIS143Histidine Polar positiveHHIS144Histidine Polar positiveAALA145Alanine Small Hydrophobic Non-polarYTYR146Tyrosine PolarTTHR147Thereonine Small PolarNASN148Asparagine Small Hydrophilic PolarVVAL149Valine Hydrophobic Non-polarVVAL150Valine Hydrophobic Non-polarGGLY151Glycine Small Non-polarLLEU152Leucine Hydrophobic Non-polarGGLY153Glycine Small Non-polarDASP154Aspartic acid Small Hydrophilic Polar negativeSSER155Serine Small PolarSSER156Serine Small PolarTTHR157Thereonine Small PolarWTRP158Tryptophan Hydrophobic Non-polarRARG159Arginine Hydrophilic Polar positiveLLEU160Leucine Hydrophobic Non-polarPPRO161Proline Small Non-polarCCYS162Cysteine Small Hydrophobic SpecialLLEU163Leucine Hydrophobic Non-polarNASN164Asparagine Small Hydrophilic PolarRARG165Arginine Hydrophilic Polar positiveYTYR166Tyrosine PolarVVAL167Valine Hydrophobic Non-polarYTYR168Tyrosine PolarMMET169Methionine Hydrophobic Non-polarFPHE170Phenylalanine Hydrophobic Non-polarLLEU171Leucine Hydrophobic Non-polarAALA172Alanine Small Hydrophobic Non-polarPPRO173Proline Small Non-polarFPHE174Phenylalanine Hydrophobic Non-polarLLEU175Leucine Hydrophobic Non-polarLLEU176Leucine Hydrophobic Non-polarPPRO177Proline Small Non-polarIILE178Isoleucine Hydrophobic Non-polarAALA179Alanine Small Hydrophobic Non-polarTTHR180Thereonine Small PolarPPRO181Proline Small Non-polarLLEU182Leucine Hydrophobic Non-polarVVAL183Valine Hydrophobic Non-polarAALA184Alanine Small Hydrophobic Non-polarVVAL185Valine Hydrophobic Non-polarEGLU186Glutamic acid Hydrophilic Polar negativeRARG187Arginine Hydrophilic Polar positiveLLEU188Leucine Hydrophobic Non-polarRARG189Arginine Hydrophilic Polar positiveKLYS190Lysine Hydrophilic Polar positiveVVAL191Valine Hydrophobic Non-polarEGLU192Glutamic acid Hydrophilic Polar negativeLLEU193Leucine Hydrophobic Non-polarGGLY194Glycine Small Non-polarTTHR195Thereonine Small PolarAALA196Alanine Small Hydrophobic Non-polarLLEU197Leucine Hydrophobic Non-polarRARG198Arginine Hydrophilic Polar positiveTTHR199Thereonine Small PolarLLEU200Leucine Hydrophobic Non-polarAALA201Alanine Small Hydrophobic Non-polarLLEU202Leucine Hydrophobic Non-polarIILE203Isoleucine Hydrophobic Non-polarSSER204Serine Small PolarLLEU205Leucine Hydrophobic Non-polarGGLY206Glycine Small Non-polarLLEU207Leucine Hydrophobic Non-polarYTYR208Tyrosine PolarSSER209Serine Small PolarHHIS210Histidine Polar positiveYTYR211Tyrosine PolarWTRP212Tryptophan Hydrophobic Non-polarLLEU213Leucine Hydrophobic Non-polarLLEU214Leucine Hydrophobic Non-polarLLEU215Leucine Hydrophobic Non-polarNASN216Asparagine Small Hydrophilic PolarVVAL217Valine Hydrophobic Non-polarSSER218Serine Small PolarGGLY219Glycine Small Non-polarFPHE220Phenylalanine Hydrophobic Non-polarKLYS221Lysine Hydrophilic Polar positiveNASN222Asparagine Small Hydrophilic PolarPPRO223Proline Small Non-polarSSER224Serine Small PolarSSER225Serine Small PolarAALA226Alanine Small Hydrophobic Non-polarLLEU227Leucine Hydrophobic Non-polarGGLY228Glycine Small Non-polarCCYS229Cysteine Small Hydrophobic SpecialMMET230Methionine Hydrophobic Non-polarFPHE231Phenylalanine Hydrophobic Non-polarLLEU232Leucine Hydrophobic Non-polarTTHR233Thereonine Small PolarRARG234Arginine Hydrophilic Polar positiveSSER235Serine Small PolarLLEU236Leucine Hydrophobic Non-polarLLEU237Leucine Hydrophobic Non-polarAALA238Alanine Small Hydrophobic Non-polarHHIS239Histidine Polar positivePPRO240Proline Small Non-polarYTYR241Tyrosine PolarLLEU242Leucine Hydrophobic Non-polarHHIS243Histidine Polar positiveVVAL244Valine Hydrophobic Non-polarNASN245Asparagine Small Hydrophilic PolarIILE246Isoleucine Hydrophobic Non-polarFPHE247Phenylalanine Hydrophobic Non-polarQGLN248Glutamine Hydrophilic PolarHHIS249Histidine Polar positiveIILE250Isoleucine Hydrophobic Non-polarGGLY251Glycine Small Non-polarLLEU252Leucine Hydrophobic Non-polarPPRO253Proline Small Non-polarMMET254Methionine Hydrophobic Non-polarFPHE255Phenylalanine Hydrophobic Non-polarSSER256Serine Small PolarRARG257Arginine Hydrophilic Polar positiveDASP258Aspartic acid Small Hydrophilic Polar negativeNASN259Asparagine Small Hydrophilic PolarKLYS260Lysine Hydrophilic Polar positivePPRO261Proline Small Non-polarRARG262Arginine Hydrophilic Polar positiveRARG263Arginine Hydrophilic Polar positiveIILE264Isoleucine Hydrophobic Non-polarHHIS265Histidine Polar positiveMMET266Methionine Hydrophobic Non-polarMMET267Methionine Hydrophobic Non-polarSSER268Serine Small PolarLLEU269Leucine Hydrophobic Non-polarGGLY270Glycine Small Non-polarVVAL271Valine Hydrophobic Non-polarLLEU272Leucine Hydrophobic Non-polarNASN273Asparagine Small Hydrophilic PolarLLEU274Leucine Hydrophobic Non-polarAALA275Alanine Small Hydrophobic Non-polarRARG276Arginine Hydrophilic Polar positiveLLEU277Leucine Hydrophobic Non-polarPPRO278Proline Small Non-polarVVAL279Valine Hydrophobic Non-polarLLEU280Leucine Hydrophobic Non-polarDASP281Aspartic acid Small Hydrophilic Polar negativeWTRP282Tryptophan Hydrophobic Non-polarAALA283Alanine Small Hydrophobic Non-polarFPHE284Phenylalanine Hydrophobic Non-polarGGLY285Glycine Small Non-polarHHIS286Histidine Polar positiveSSER287Serine Small PolarIILE288Isoleucine Hydrophobic Non-polarIILE289Isoleucine Hydrophobic Non-polarSSER290Serine Small PolarCCYS291Cysteine Small Hydrophobic SpecialHHIS292Histidine Polar positiveVVAL293Valine Hydrophobic Non-polarEGLU294Glutamic acid Hydrophilic Polar negativeHHIS295Histidine Polar positiveHHIS296Histidine Polar positiveLLEU297Leucine Hydrophobic Non-polarFPHE298Phenylalanine Hydrophobic Non-polarPPRO299Proline Small Non-polarRARG300Arginine Hydrophilic Polar positiveLLEU301Leucine Hydrophobic Non-polarSSER302Serine Small PolarDASP303Aspartic acid Small Hydrophilic Polar negativeNASN304Asparagine Small Hydrophilic PolarMMET305Methionine Hydrophobic Non-polarCCYS306Cysteine Small Hydrophobic SpecialLLEU307Leucine Hydrophobic Non-polarKLYS308Lysine Hydrophilic Polar positiveVVAL309Valine Hydrophobic Non-polarKLYS310Lysine Hydrophilic Polar positivePPRO311Proline Small Non-polarVVAL312Valine Hydrophobic Non-polarVVAL313Valine Hydrophobic Non-polarSSER314Serine Small PolarQGLN315Glutamine Hydrophilic PolarFPHE316Phenylalanine Hydrophobic Non-polarLLEU317Leucine Hydrophobic Non-polarRARG318Arginine Hydrophilic Polar positiveEGLU319Glutamic acid Hydrophilic Polar negativeKLYS320Lysine Hydrophilic Polar positiveQGLN321Glutamine Hydrophilic PolarLLEU322Leucine Hydrophobic Non-polarPPRO323Proline Small Non-polarYTYR324Tyrosine PolarNASN325Asparagine Small Hydrophilic PolarEGLU326Glutamic acid Hydrophilic Polar negativeDASP327Aspartic acid Small Hydrophilic Polar negativeSSER328Serine Small PolarYTYR329Tyrosine PolarLLEU330Leucine Hydrophobic Non-polarAALA331Alanine Small Hydrophobic Non-polarRARG332Arginine Hydrophilic Polar positiveFPHE333Phenylalanine Hydrophobic Non-polarQGLN334Glutamine Hydrophilic PolarLLEU335Leucine Hydrophobic Non-polarFPHE336Phenylalanine Hydrophobic Non-polarLLEU337Leucine Hydrophobic Non-polarRARG338Arginine Hydrophilic Polar positiveRARG339Arginine Hydrophilic Polar positiveYTYR340Tyrosine PolarEGLU341Glutamic acid Hydrophilic Polar negativeEGLU342Glutamic acid Hydrophilic Polar negativeFPHE343Phenylalanine Hydrophobic Non-polarMMET344Methionine Hydrophobic Non-polarVVAL345Valine Hydrophobic Non-polarQGLN346Glutamine Hydrophilic PolarAALA347Alanine Small Hydrophobic Non-polarPPRO348Proline Small Non-polarPPRO349Proline Small Non-polarIILE350Isoleucine Hydrophobic Non-polarTTHR351Thereonine Small PolarEGLU352Glutamic acid Hydrophilic Polar negativeLLEU353Leucine Hydrophobic Non-polarVVAL354Valine Hydrophobic Non-polarGGLY355Glycine Small Non-polarLLEU356Leucine Hydrophobic Non-polar
Physico-chemical properties
Showing 1/1 rows and 9/9 columns.
| Input | Molecular weight | Atoms | Aromaticity | Instability index | Isoelctric point | Extinction coefficients | GRAVY | Negatively charged residues | Positively charged residues |
|---|---|---|---|---|---|---|---|---|---|
| FADS6.fasta | 40446.92 | 5722 | 0.10 | 54.04 | 8.13 | 58900 : 59400 | 0.17 | 30 | 32 |
Amino acid composition
Atom composition
Charge at pH
loading..
Flexibility
Vihinen 1994. scale
loading..
Hydrophobicity
Kyte&Doolittle scale
loading..
Evolutionary Analysis
Pfam Search
| Entry Type | Family | Accession | Clan | Description | Envelope | Alignment | HMM Model | Bit Score | E-value | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Start | End | Start | End | Start | End | Length | |||||||
| Domain | FA_desaturase | PF00487.27 | CL0713 | Fatty acid desaturase | 77 | 328 | 81 | 326 | 5 | 252 | 254 | 57.3 | 2.2e-15 |
|
#HMM 5 allla.lllglf.llgitgslaHeaaHgalfkkrklnrwlndllgalaglplgisysawrisH.lrHHay..tngpdeDpdlaplalsrfeglfryllrlllgllvlgwllalvlllwlrrlarrrapsksrrrkwrllawlllllawlg
#MATCH +++ + +lg++ + ++t+ H a+Hgal+++ rw +l ++ +++ ++ ++ + H +HHay + g +D ++ +r l+ry + ++l +++l+ ++++l + ++ +k+ ++ +++l+ l + #PP 44444689999965.444699**********74...555555555559999999****************966666.99999.....577777776.77888888888.........888888888888888886666666666666666 #SEQ 81 VFASGiTILGVChY-TLTVKGSHLATHGALTES---KRWSKIWLLFFVEVCTAFTAEHATHGHvKMHHAYtnVVGL-GDSST-----WRLPCLNRY-VYMFLAPFLLP---------IATPLVAVERLRKVELGTALRTLALISLGLYSH #HMM 155 lwlallllaglall.....lwlvplllllfllalvlnyveHyg.......gdwgerqvetsasir.saswllnlllgnln..yHieHHlfPgvpwyrLpelhrrlrellpehglpyrs #MATCH wl+l + ++ + ++l ll++++l++ n+++H g + ++ +++ + + ++l++ +g+ H+eHHlfP+++ + ++++ + ++l+e lpy++ #PP 6666666555554476777777777777777764..9**********98444444444444444499********9986677**********************************97 #SEQ 231 YWLLLNVSGFKNPSsalgcMFLTRSLLAHPYLHV--NIFQHIGlpmfsrdNKPRRIHMMSLGVLNlARLPVLDWAFGHSIisCHVEHHLFPRLSDNMCLKVKPVVSQFLREKQLPYNE |
|||||||||||||
MSA - Sequence conservation
loading..